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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60465540
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKRQTKNSP PLVGNSSPTS QSSQSPEISK KKLKKIEQKA NRPKILVERP LSNLKFGGLV  60
   61 VFFICLVIFY IYLRINPLYD SGNNSNNLNN NNDNNNTNIN IIDDIKSMKK IENGLKDIAK 120
  121 YKEWNEECKN KTIAVGYNTN LDLVVDAIEL MDKLKLKSSI HNRPMSKEVI KSLDDFEQTF 180
  181 SHYFKSGSAA ERMIENEDTF SAILAAALQS ESKQFYTGGN AGIMANRLVA DGCRVYLGGI 240
  241 IGKKLKELLS PSVSIIGYQS ENGEEFDEIH LIMEYNKQSR WGSISPPRSN RFIISRDNTN 300
  301 SHLMTMESFH QEIEKKQPDL LLLSGLHLLT EEAQERRVND MVNLLKQIPY NNNPSNFLNH 360
  361 PSLNVPIHLE LASIASPSYI NLLAKKIIPF VDSVGLNEQE LGFIYVSTGG KKFSLDDFKE 420
  421 PSVNVVVNAL LHIMEISFHY ATTTTTSTTA DRNVDDNILG DFGIPTMSKQ RLLTRIHFHY 480
  481 LSFHLIITKS YSQWSPKLTS ASVAASSIEA TFQACRFNSV ELLLPLSVEV DYRYTPGATK 540
  541 SIIIDPSSPV TTWQDSGYEF HLAPVLVCKS PLKTVGLGDS ISTMGFLYQT IKSNEN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle