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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60465933
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKINKKLLFL LSLLIYSIVI VEVDGIQILL WSGGTWSGQG YEDWGLPNYL GQHVKKEKCP  60
   61 VDCVFISQQQ FHADVDAILF EAQPLASWSY TFLKQPPAFP QKEVAQYYIN FGYEHEKYFP 120
  121 ISTHPDYQKH IDINSTFRST DQVQVTFACS WGSRDDGNIE NFRKEPVKFE DKNGFVGFMS 180
  181 TNCDGGGAIY RTCYIIEMMK HTQVDAMGEC LNNKKLNKKD FPHAVFDDLG DSLRIKELVL 240
  241 SKYKFSLAFE NNNITDYVTE KVYTSLLSGS IPIYMGSPNI DEWVPNKSII KTDDFKSPKE 300
  301 LVDYIIYLSK NKTAYEEYFE WKKQPFPEKF IEKYNRCIFY GADCRLCQYI DNLKKKINNG 360
  361 IGFRSTFGEP YEDSKELRVL DINKETCVSI KQDLNYVPPV KDKFTIMFWL ILEDVHDEKP 420
  421 IITMDKHGLV VSVVQIWKRF YVKFCFKSKC FLSDTPLDSN EWKHFAISVG PSLQTTTTDL 480
  481 NSKNNNNNNN NNNNNNNNNN VGNGVIDSFL DSDGMDDFSD SFETTTIPTT RTIKTKDIVD 540
  541 TVDTTTISNV PSTIKIFVNG ILDSTSTSFL NLDSLSTSDI NIGCEKIVAK LDDLSIWRTN 600
  601 LEEKEIGEAM FKKYRGDEPG HLLYMTFNSI QIKDYSINNQ FTTIVPSNAV TETIGHKQLI 660
  661 LTVGE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle