YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|60466012
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLLYSLVAL LGVSSVAFGD NSCNQLLSSL ADPSKCVQVS ISGVHSQSLA QEGYKGNLVF  60
   61 ASGEFVLRES LYNLQTYETT CSRGGLVQPF AADDQFRVED FSIRLSDGNL RLKQINTQLT 120
  121 CNGNVGFFNL NNFYYALALK SYDTCPRLYY GEPCNTPTVT PTTTPSPTTK PPTGPLKFNY 180
  181 KLDIDWQWDS NNVHYYQYRV TVTNNDSTAI KSIQIHSDNW NPTEFWNVEK NAQTGNLGFP 240
  241 SFVNTLPVGD SFSFGFVSAV VNPTFSTVSF ERV

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	273	0.99