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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60466331
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.89
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKILKALILL TVLFKTVIGG VETSTKGLHV YGRNILNENG ELVMLRGANR PGTEYCCVQY  60
   61 AKIFDGPHDQ AQVDEMRKWK MNAVRVPLNE DCWLGVHAPE TEYFGASYRK ALEDYIKQYT 120
  121 DSNMAVIIDL HWASENGKLA TQQIPMPNNG NSLLFWEDVA RTFKDNSRVL FDLYNEPYPY 180
  181 GNSWANPDAW QCWKNGTDCG TLGYEASGMQ QMIDAIRSTG STNIILLSGI QYATSFTMFL 240
  241 DYQPTDPAKQ MGVALHSYDF NYCRSRGCWD TYLKPVYSLF PMVATETGQK DCLHDFLSDF 300
  301 INYCDSNDIH YLAWSWLTGE CGIPSLIEDY EGNPSNFGVG LKRHLSDLAK GVTPYYTDTF 360
  361 EIYNDKLTHW ADDWSSATRI INSTTQVYSG KYSIEWLPSA SKSLHFMCWS CIKPKIHKSV 420
  421 DFYANGGSKG GQDMDIDLLK LNPDGTNTIL HTYKLSQLLG GKVVPKSEWV KVVLDLTTLP 480
  481 KDEEYDGFWL KSDTSQPSMY VDEITIQAIH EPPTQIPDSQ WEEQNGDSSI GSIITVNLIL 540
  541 FIFTLLSLLL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle