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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GACK_DICDI
Protein type: Globular with Signal Peptide
Type Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLVYEKSSF VLIMAQIAEA QNIMTRSTSS NDLLSTSAGS PPSPTSAAIL LSSSPSPTIT  60
   61 IASLPSGLNI VSNPNGNPAI NVVLLNVNLN KEEEKMTLGQ LLACFPEVPS NIPIQLNPNQ 120
  121 HKLRRDTIVS QPVITSKQSS LFETSKQSNI PLSASVTNLQ TLNKEKENYN LLNSSTNSLH 180
  181 SLIITPPTSN NTSSNNFVGG NIINSSSEDS ILPPPHIITT TTTTTTSLPP RSPMPLPSSN 240
  241 CINIPNNINI PDNISESSTC SLSSNASNNY PQSPPKYNNF EINQNNNNSI SLSKSQSLDN 300
  301 ILTNSNNNNN NEITISSNIP IPLPPQSSSP PPTRNNQSSP SPSSPQQQNI MPTPPSTSLT 360
  361 PPQSPTLSPS SSTHSTPTQT TTTIKLPPSS PPSTISQNNA RKTQIPTTTT TTTTTTTTTS 420
  421 TTSTTSPNPV VNNKNLNTPS SSFSPTKRLT IAFGSLTRSS NTPPPESSIV PIRWEINLNQ 480
  481 IKIASTSTSN TNTVSSQNLI NSSNTNNNNN NNNNNNNNNN NNNNNNNNNN NNNNSGNNNN 540
  541 NNNNNNNNNN QLYEQYYKLC KGEFQQNTSL YNKTFNQLLD VDINTSLSLL DKCYDSILKS 600
  601 NGIGLLSSKD QYLSTQSKEK DPNRVKSLLS VVKNAVSEDI LNVKPSKTML YFSNFGKTIP 660
  661 INLEVIDECI LNNFSSKKVK FKVLMGPPSK THTINVSEKE GFIGKKSSIT LNFSLILKSS 720
  721 IKLRRVVIIE IEGGVRYFIL VQVESNKTAF GQPIEDSELV EDNTSFGPML VPRALVILKQ 780
  781 AFFGCNAHLT ESIFRLPPAN DSEYNIVKDR VNREAIGTTE PHCIATLIKV FFRELPNLLL 840
  841 NDIDPEIFLN FKPTAQSADT ASSAATANSS SSGSGNGNSS PNNDDPTMDP VFIVNLIEEK 900
  901 RRSTFLWLVD LLAEVTKFES SNKMNSKSLS IIFSPNLYFA PSICSAENSF AISGKVVSFI 960
  961 LELIQFNKSL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle