YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|60466552
Protein type:	Globular with Signal Peptide
Type Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKILFFIILI INCYLIQNSN SENIRPVVLW HGLGDSGLDP LTMGKLKELI ENQLPGVYVK  60
   61 NIAIGDSIAE DSFNSFFKNV NEQLEIVCKM LKEDTNLTSG FNAVGLSQGG QFLRGYVERC 120
  121 NDPPVYNLIS LGGQHQGVSS LPRCTALNST LCKIADDLVE LGVYEKYVQN TLVPGEYWQD 180
  181 PFNYDEYVEK SVFLADINNV RSEKNQTYKD NLLSVNNFIL GEFLADTIVV PRESELFGYY 240
  241 QPGQDNIILP MEKTDLYIED WIGIQQLDNE GRLIKISCPG NHLQFTDQWF NQNVIPYLNN 300
  301 QIN

Type	Start	End	Confidence
Signal Peptide	1	21	0.55
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	303	0.99