YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ATG9_DICDI
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHEDRGGDY YPMMDDPEDR NFIQAKYPNS TGHMSSGGGS NHMSFDDNHG IEMLRDDEHS  60
   61 LLHESPVSIP AIHNLDSFLT DVYNYFRGKG FMCIFFNDLF ELVSSLFVVL FFTFLVCFVD 120
  121 YSKLFSEQMP PPALRESVNF SAPIPIWLMV FLVIFSLYWL SKLFSFFSSI KTNWEISSFY 180
  181 KNTLKINEDD IQTIEWREVV SKIVLVPRLC IVKENMNALD IANRIMRKEN YIIGLINQRI 240
  241 LNLSIPFPFL RNLTFITKTL EWSLMYSLFN YIFDENGIIK SEFQDPTQRK RLSRGLSRRF 300
  301 MTIGILGLFT TPFIFFFLLI NFFFEYAEEL KNRPGSLFSR EWSPLARWEF RELNELPHYF 360
  361 QNRLNLSYSH ANQYVESFPS QMLSTIAKFI SFLFGSVLAV FIVLGIVSDH FIMNYQIFDR 420
  421 TPIWYIGILG TIVAITRSLI VDENQVFQPA KHMARTVQNT HYLPMSWVGK THTHKVRDEF 480
  481 LVLFEYRIVD FVRDIFSVLF TPFILIFSLP KSSQAIIDFF GNNTVVLEGV GPICQLGDFS 540
  541 NIRKLGDNSF GSLNHSQNKI SLTNNAKLEK SIINFKCLNP EWNTDNNELL QNLNEFSKIK 600
  601 NNNNNNNNNG SNNHIGNHSQ LPTTSVDDFQ FIHDSHYIPH EIIDAVLGTH HHSQQSNNNA 660
  661 PRFKTGRVDQ NILNAVNDLH QSFYESQYKH KNDNFVNSI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle