YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	VAM7A_DICDI
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQTDILYAC VSYKGVCLVE HKIANGNFID LARRLITKIP PTSKKIYTSE NHNFHYISEN  60
   61 DLAFLCLCHE KLGVQIPSEF LSDIRQQFIR SYGQSFSQNS PTATYDPFIR VLEERMKYYS 120
  121 NPKSNKMNLV MDQVSEAKGA LTDAIEKTIH RGEKIEIIVD KTERLQSESF VFKSNSVALK 180
  181 RKLWWQNKKL AIAIGLVVCI LIAVITLALL KYFKVI

Type	Start	End	Confidence
Cytoplasmic	1	189	0.92
Transmembrane Helix	190	210	0.97
Non-Cytoplasmic	211	216	0.74