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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60466998
Protein type: Transmembrane
Type Confidence: 0.81
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKREKIIKFL LLSFFLLIAF NLFINYSPKN QLSSNKVQEN DHHSNSNNNN KNNDHSKYVK  60
   61 IQTIKDIEIK EEKTIKKIEE NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 120
  121 NNNNNNNNKN NNNNNNNSNS DNENNNKYNG SNIIIYKNNK INISDSDQIK LDEDIKKDLK 180
  181 IIEELVKIDL EIKLDKNKTI NQINDTNLDS NDESKNNSSI NNDNNLKNNN TINNNNSSVN 240
  241 NDNNLKNNNN TINNNNSTIN NSTIINNDNN FKNNNTIKNN STTINSNDKT INNSTTTTTI 300
  301 NNKSSRNDKN LNNSNSTINN INNNNKTTNT STINNKNINN NNFKNESSIV PIKKKSDKKL 360
  361 ILVMDRSLFR GVSWKSGFKK CPKLKCELTY NRTLIDDAVG VLYFLPRFYR AKYNYSEVSR 420
  421 KNSRQLFFAW TMESPSLYSY QNNMTFLNSM FNVTVGYTRF DYKTPNHIYT PYGPTPFNSS 480
  481 DHYVYKHAIR NVTTVPEKRP NHIMWMCGNC NKETIGRTDL VKSIMNLTQI DSYGTCLHNK 540
  541 NLTIDYGRRV QGRSVQKIEM LLSYNFVISI ENSRCDDYVT EKLWEALSYG TIPIYLGAPN 600
  601 IRDWLPHPDA IIHIADFPSV FDLVKYIDQV SKNETLRLKH LQWISKPYPD RFKKLLDESN 660
  661 ENLDLFCNIC KRVVDISKNE TLTYQPLQEP FKSCIKEKFK LPLYPKGYIP PKPTSLLDSN 720
  721 SIELTSLQNI INSKKDEEDD DEDEHNSIDL IKENLINSIE SSIKYFNNNS EKLNKIK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle