YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|60467062
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANLNQSSSS IQVPKLSKYM ISFGYFLMGI IVTATMFLSN NNNFSIVSYT LLSEIIFGVI  60
   61 ISFLHIGFSI FAFPGNSSTL DKINRSLIGL SIGNFVFYFL LILYGAPFLK SIHTTFFFGF 120
  121 LLSSMCCLPP SILLGLNPQN WKDLFFTPNH NNIIDTCTTI LVVFSILGAW IGAFPIPLDW 180
  181 DRPWQQWPIS CVFGSIVGHI FGLFICSVYS LVHKEKKSM

Type	Start	End	Confidence
Cytoplasmic	1	18	0.96
Transmembrane Helix	19	38	0.94
Non-Cytoplasmic	39	50	0.80
Transmembrane Helix	51	73	0.86
Cytoplasmic	74	86	0.81
Transmembrane Helix	87	106	0.95
Non-Cytoplasmic	107	114	0.75
Transmembrane Helix	115	136	0.94
Cytoplasmic	137	152	0.92
Transmembrane Helix	153	174	0.90
Non-Cytoplasmic	175	188	0.84
Transmembrane Helix	189	212	0.89
Cytoplasmic	213	219	0.95