YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|60467051
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTEEPSSVS PQPNVEQPTQ PPQYPPGYSP QATQPPQYPP GYTPQETQPP QQQQPPQQGY  60
   61 PQQYPPQQPP PQGYPPQQYP PQQGYPPQQG YPPQQGYPPQ QGYPPQQYPP QTPYGQQQPY 120
  121 TVVMAPAPVV VAPKQTTQSE DTSSMLIFII GFFCTYKLIF KSWEKKKKKK KKKNRIVWLA 180
  181 GFAYIRSKSK TARIYGILSV VFFFVVVIII IIIVASVVAT AKKVNDDCYS YYGSCY

Type	Start	End	Confidence
Non-Cytoplasmic	1	142	0.93
Transmembrane Helix	143	160	0.89
Cytoplasmic	161	193	0.94
Transmembrane Helix	194	217	0.91
Non-Cytoplasmic	218	236	0.92