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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60467101
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKYHFQGLS DNKVKENREK YGSNTLPPVE IESFFSKLME NFQDPLIHIL CVALVITVIL  60
   61 SFVGYAEWFE GVGIASAVFL ATFVSTYSEY KNENSFQELQ EKASRVKCNV FRNGSHISEV 120
  121 YGFDVVVGDL VLLQAGDKIP ADGRLVAGEL HVNQSTLNGE PHLEKKIVAP ENYEPTTRND 180
  181 FLDHYLCFRG TVVEDGEGVL LVSAVGSSTL YGELAIELSK ADERESPLQI KLSNLADGIS 240
  241 TIGYIGAGFI VISFLFKQFV MDNNYNWSEI STYISNYPIV LKDIVNSITL AIIIIVVAVP 300
  301 EGLPMMIAIV LSLNMRKLLK AKVLVRKLLG IETAGSLDIL FVDKTGTLTK GKFIPRTFIS 360
  361 GSAHTYKGFN QIPKELREVL SFTVRESTSS VIGEDGQIVG GNASDKALLQ FLDKESLLAD 420
  421 YQVKVEKEIL FHSERKYSAA LLKVPLSGGP TGKAPKGIVT CSHKLKNDER YVEITCLKGA 480
  481 PEIVLNRCTS HFNEDGHIEP IPDSVGLTNS INSLSEQGIR VIAVAVSREP LVETETLPNS 540
  541 LILVGIVGVY DEIREESRSS IQTARSAGIQ VVMITGDKKE TAIAVAHQIG LISPGEESQP 600
  601 GVVLTSFELQ NLSDNKLANM LPHLRVVSRA LPSDKVRFVN VAQSLHKVVG MTGDGVNDSA 660
  661 ALKHADVGFA MGSGSEVSKE AADIVILDDN FASITQAVLY GRTIYKSIQK FIVFQSTINV 720
  721 ASTLIVFLGP FMGFDFPLTL IQLLWVNLVM DTLAALAFGG EPALTRYMQE KPIKRDQSII 780
  781 TSRMWGSILG GGPFISAMSI LFLTNDYVEA FFTRNGEPYQ PAFLTAFFAF FIFLSVINAF 840
  841 NVRTSRLNLF DHLFDNKGFI VVVFFIFFVQ IVFTYIGGKI LRTVGLTSSE WALVVAMSFS 900
  901 VIPFDLIRKF ALNLFLFKSK KNINKTD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle