YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|60467143
Protein type:	Globular with Signal Peptide
Type Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLNKTLFKR VYALCFSLLM IIVSYNNFYN NFLGNPGVYF YHKDIERATY GNYYNNDAKY  60
   61 HNNSNKFNVD NDDPYKHTNI EGEGVITRDA IKELNISNDQ YFYFKYIGRV DTRKLDRDTI 120
  121 IRCKGLDDKF YYIVRKPYYP NQKLDMEIWS DYIVDFEAPK KKLSSRNVPR TLISMEPQPN 180
  181 RTCEFDKDCF EFFNFKVSFE SQSDIRMGFD TPSSSAYKLY NKLTIDEIAK IQTQFKLEYQ 240
  241 VMKHNNTLQP HQKSIPLANW FCTNCNSHSN RNEYVQELMK FIVVDSFGKC LKNMPTSNFL 300
  301 SRGSGDPFER KRLFITRYKF TIVFENSICK DYVSEKVLDA LIAGSVPIFM GHPSTIKYLP 360
  361 LNSYIFVGDF KNAEHLANHL KFLSENDNEY FKLHTWRTNQ TVIDQWKGVN NYPNKPGFRF 420
  421 REVQCPILRH YQRLKTGKIP LKKLKYKPMN QVCLPSNYYK IK

Type	Start	End	Confidence
Signal Peptide	1	24	0.46
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	462	0.99