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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60467142
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNFASPLKK VFILCFILTI IIIGYNIINE SIEFTDVFYF QQSKSFEQTR DPNQVETIYT  60
   61 KYNVDGDDTT KNYLYEGEHV IENYKSLNIS SEYLVLFNYI GYFEYRIPND AAFKCQGLDD 120
  121 NFYYVVPLDN STANIGHQLP PPSHPPVDME IYFDIKNSFQ MIDDSSPNHV PRMLITLEPP 180
  181 PFRGCEFEKS CVESFNFKLS FESKSDVRLG FDSKISPFEE FRKLPLSLIL ETQNQFKNDY 240
  241 EQRKLNNSLL AHQTSFPMID WFCSNCETQS NRIEYVKELM KYMVVDSYGN CLKNMPTPDY 300
  301 LARRSVDPFT RKRLFITKYK FTIVFENSLC KDYVSEKVLD ALSAGSVPIF MAHPSTIKYL 360
  361 PYQSYIYVGD FDSAEELANH LKYLGENDIE YNKFHAWRSN ETAIDQWKGV NNYPNKPGFK 420
  421 LLELQCPILR HFLRLKTGKI HLKNLKYKPF DEVCLPSTYF KVK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle