YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|60467130
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSISIVSLL ILYCIISCGN VVVNAINGQV TYYNDQGYGS CGTLIDANTQ FLAAVPPGFW  60
   61 TTTNPNLDPV CGKQVKLTYN GNSITLPVRD KCPGCPNNNI DISAPAFIQL IGSLGPGRVS 120
  121 VTWEFVGSSS SGGSTTGTVS TTNGNSGTCP RKASVSVGQG CYDVWVSKCN NAWDENQLYA 180
  181 ANPGVSCTSL QVGQQLCCGG STTGGSVTCS RKASVSAGQG CYDVWVSKCN NAWNENQFFA 240
  241 ANPGVFCTDL QVGQQLCCN

Type	Start	End	Confidence
Signal Peptide	1	25	0.94
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	259	0.99