YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|60467184
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSISFICLL IIGFLLIGNS FANDSIKSDE ITCNLCNAIV GFAEKYVTTN ATEQELIKKL  60
   61 DDYCGILPSE FSQSCVETVN NYGVLIIRLL INKEDADNIC IMIELCPKSS SSSPSLFLIN 120
  121 ENNSNSNGTD CEICTFITKY AENLLEANKT IEDIVKVVDD FCKVLPSQYK TDCVAMASNY 180
  181 IPAIVKMLEN NYNAEQVCQK LSFCLPPPPP STEGTTLCDL CLDFANDAIE IVENSGDVEA 240
  241 QLLKECKYFF SFIPTIENQC EKIISENFDA IVNEIQDHIN PTSLCQNFLH ICN

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	293	0.99