YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MCFR_DICDI
Protein type:	Globular with Signal Peptide
Type Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVHGNTKTS PMVTLLAGGV SGVIAKSTIA PLERVKILYQ VKSKMYSFNS VYGLMKNIIK  60
   61 NEGLAGLWKG NTATILRIFP YSAIQWTSYD YLKNNFVTDK KSSVQIFIAG SLGFSCAILL 120
  121 TYPLDVIRAR LALSYSNNNN NNSINSKNLN SSTQPPKVLK NGIGAVNIEK SIDFNGYKTK 180
  181 GLFKGIWRGI LPTLYGSIPY AGVGYSSFEY FKRIAPDSFR NEKGDVIGIY KLISGGVAGG 240
  241 LGQTAAYPLD VVRRRIQTTG YGDGKGVENL KHSTLKTMFT IFQKEGIYAL FKGISINYIK 300
  301 VIPTNGVAFL TYETLCDYFN SKLNKN

Type	Start	End	Confidence
Signal Peptide	1	25	0.62
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	326	0.73