YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Y3629_DICDI
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENFKNNELE SSPIINKNNS SHSINNEDNN YYSHNLEHND NNNNDNNNTI TNSHINNHDH  60
   61 KHNHEHEHKH KHNHDHNHDH DHNHEEEYGH GNELEHNNDQ EHNVGNKNLL TNNNNQSKKK 120
  121 KHGHSHGGGE DGSSSGGGGG RHGHGHSHGG GSGSDHNHGS SDEDDEESKP LNQLRNLDSK 180
  181 KKARYSLILA LTLTTIFMVG EIVGGYFANS LAIMTDAAHL LTDIGAMFLS LFAMWISQHP 240
  241 PTSSMSFGFH RAEILGALVS VLMIWALTGV LVYEAIQRIL YPPDAVDGKI MFIIASCGLF 300
  301 INIIDAIILH WGSGGHGHSH GGGHGHSHGI GGGTQKKKSK KNRLLNNQGQ DIEDLGGENG 360
  361 KNKKGVRNIN VHSAYIHVLG DCFQSIGVMV ASCIIWVHPH WKIADPITTL IFSVIVLGTT 420
  421 IKLLRESLGV LMEGVPPEID VSEVKGDLSE IEGVTEVHDL HIWSITLGRP ALSVHLTILP 480
  481 TIDPEEILSI ANKILLEDYE INHTTIQIEK PLVKDKCKDH SCPPPKPKKK KIKNDNLSSP 540
  541 PNQ

Type	Start	End	Confidence
Cytoplasmic	1	184	0.98
Transmembrane Helix	185	208	0.89
Non-Cytoplasmic	209	216	0.81
Transmembrane Helix	217	236	0.93
Cytoplasmic	237	253	0.78
Transmembrane Helix	254	273	0.91
Non-Cytoplasmic	274	289	0.82
Transmembrane Helix	290	311	0.92
Cytoplasmic	312	373	0.95
Transmembrane Helix	374	398	0.84
Non-Cytoplasmic	399	402	0.82
Transmembrane Helix	403	424	0.85
Cytoplasmic	425	543	0.95