YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|60467688
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTFKISDNK DEKCRVGTIE IGEKSYSTPS FLLYTKEGSP INLTKDLLNQ LPHEKTHSLQ  60
   61 LLFSDLFQFT DVLEKFEKGV HKFLALQDHL LFLLIRDSSS FVEAEFNDDS ISVTTRKGKT 120
  121 KITIQDYVKL VKIIKPDFAT SLSVDIAWET SRKKATKIVN SSSVWLEKFL DSNTTTAINT 180
  181 FGVIQGGKFD DLRMKSLQDL LKHKDKLFGT ILSGFGTGET NDERNQIIKK LIVIIIIIII 240
  241 IIIIIIIIII IIIIIIIIII FIFINILIKI DYYLFIYLG

Type	Start	End	Confidence
Cytoplasmic	1	232	0.88
Transmembrane Helix	233	264	0.95
Non-Cytoplasmic	265	279	0.76