YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	KMO_DICDI
Protein type:	Globular with Signal Peptide
Type Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDILLNKPIT IVGGGLAGSA LALLLGQKGF PIQVIEKRPK QSENIRARSI NLALSDRGVK  60
   61 TLTKTGYVDD ILKIAIPMKG RMIHSLDSVQ TFQAYSSDSN KHLYSVSRQL LNDRLREHTE 120
  121 KLENVKFIFS DACKSIDLKQ CTIQTQDSNQ TIEASTIIGC DGAFSAVRGS MVKLDRQDYS 180
  181 QSYLKHGYKE LCIPSGPNQT FQIDKNSLHI WPRGSFMMIA LPNIDGSFTC TLFFPFDGPL 240
  241 SFSSLDTREK VDQFFKDYFP DAYKLMPDLL DDYFENPTSS LVTVKTEPYH YQGKVVLVGD 300
  301 AAHAIVPFYG QGMNAAFEDV LELFNCFEDK SLYPSSTDKP FDNDHFNNIY KKYQENRKAN 360
  361 SDAIAEMAVE NFFEMRDHVG DALFLFKKKV EHLLEVKFPS RYISRYELIS FSTQPYAYAQ 420
  421 KIGLANQQIL NELVKGNDDY NIEKIDLVLA DQLIKKYLNK

Type	Start	End	Confidence
Signal Peptide	1	22	0.54
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	460	0.94