YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MCFP_DICDI
Protein type:	Globular with Signal Peptide
Type Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTSVSSPK SKPSWVSFLS GGLAGVTAKS AVAPLERVKI LYQIKSELYS LNSVYGSMLK  60
   61 IVENEGIKGL WRGNSATILR VFPYAAVQFL SYETIKNHLV ADKSSSFQIF LAGSAAGGIA 120
  121 VCATYPLDLL RARLAIEIHK KPTKPHHLLK STFTKDGVKG IYRGIQPTLI GILPYGGISF 180
  181 STFEFLKRIA PLNEIDENGQ ISGTYKLIAG GIAGGVAQTV AYPFDVVRRR VQTHGFGDAK 240
  241 AVVNLEHGTL RTIAHILKEE GILALYKGLS INYVKVIPTA SIAFYTYEYL SNFFNKL

Type	Start	End	Confidence
Signal Peptide	1	30	0.93
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	297	0.82