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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: EXO1_DICDI
Protein type: Globular with Signal Peptide
Type Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGISGLLPAL SPVTKAIHVK DYANKRVAID GYSWLHKGAY SCSQEIVLGI PTRNYINYFI  60
   61 SRIKMLISYK VIPVVIFDGG PLPNKKLKEQ ERLRHREEYK NKAKAYLLEG NKSQANICFQ 120
  121 KAVDITPRMA FLLIKELRAL KVEYLVAPYE ADAQLTYLSI TGQVDAIITE DSDLVAFGAT 180
  181 HIIFKMDKYG YAQEIKTEDL GSCKKDGYDF IDFNQTMLRQ MCILSGCDYL PSLSGMGLKT 240
  241 SFKLLKQHRD IEKVFKYLKR EKSNFSQEYE QQFYKADFTF KHQRVFDPVS RILTTLLPLP 300
  301 TIIDSRFLND NNNNTNDGDS NGDGSSGGSG SGGGFLDFIG PVIDDEIAEK IALGIIDPET 360
  361 HEQFDKTQPY PKNTFTPQPK KLLSPISFNT KEFKNQTNNN NNNNNNIKSN NGTNNKNGMI 420
  421 LNEGKLVQKG RNLNDQFTFA SNKITQYMTT TTTTTTTTTT TKNNNNNQKQ QPMIEDDTGY 480
  481 DFQIDSFEID DCLNDDDDDE SIILSNNLNN QENVLESDCE FDDDDDQRGI DVDDSEKKDS 540
  541 FVLDSDYEDE KEEEEVKSST FNSSSSISSG NSSKIKKTLV SSKFFVSSES SVLESDDDDG 600
  601 GDDDDDSFNH NQNFSSSGNN IQPNSNIFHN GELSSYGYQK NQKNFKNVNS NSSSNSSNSS 660
  661 NSSSGNSNSG NRIFNSGNSS NKNNTNGGIV KSTLLSSNDR VSLNFFDQFQ FDGKKKQSIL 720
  721 VSQSRKSFSS PTLSNNEDYD SSFVSSTIPS SIGDDYDQMN SCSNNNNFNY NNSSNFNNNN 780
  781 INNSNNNRNS GFSGFLKRKS SSQTAAPTTP TTPTTPKTSS SSSSTLTNST ITTEHSSYIL 840
  841 KKPKYQATSN SPISTLDSSQ NYNDQSFISK KAHSFSSLDS DLIFKEDDVD NLIFNNNNNN 900
  901 NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNDNNNKIT TPSNKSFNSI 960
  961 VLTTTSATTS ITQQDNEIYT TPKKKLPSTP ISSSSNDIIS KYFSSPSKVG PKSEGAPPTP1020
 1021 VNLEGMSLRS VLSLRYQQTM ASSPTK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle