YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|118370338, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKFDFVPLF VKIWLFLSTL ICTWDASFVL LRPRTLPGGD LHAFWTPYAT YIQIDKLYGD  60
   61 MQDQFVVEQS ILNIYECIIN TIALCLIFSN SQKKQLAGTF LAILANAFTF WKTVLYFQYG 120
  121 FPHSLPIKNY VEYIFLYVVP SSFWVIVPLL SCIAISKRIS SHLLSQSSQQ SEKNTQKLKQ 180
  181 N

Type	Start	End	Confidence
Cytoplasmic	1	9	0.79
Transmembrane Helix	10	31	0.86
Non-Cytoplasmic	32	70	0.77
Transmembrane Helix	71	88	0.81
Cytoplasmic	89	95	0.84
Transmembrane Helix	96	115	0.92
Non-Cytoplasmic	116	132	0.87
Transmembrane Helix	133	155	0.91
Cytoplasmic	156	181	0.96