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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89301033, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLYLSLDNKR NMILNKFAII VFAFITLIIK ITFCQPVQRN PGAGGVSLFF SLPLTISIPP  60
   61 STPYMTFVFD NTLGLSFTSI QSVGFGAIGS QGVCQSTNSA IISTATLAQN KISIQYPFTL 120
  121 LSASSQIQCN GVSYNPKWMN VQLIGTFEYG GTININAYYD TQRNGISNQF GSAAQLDVLP 180
  181 DQITDSSINF SLSATPSQVI SQLGQYTLLI TTPLLAAQIN QIVLLLPMYW YPDTALPSGC 240
  241 QQTSTPVSTS FSSTLLQNLS ASVTTNIATS LYSVTLSFQQ ISLGGQAVDL TFQMTNPFTS 300
  301 ANIVLEGQFL QVQASFNYYT ASSTPLTAFQ TSFTSTNINA QPTQFSNCNN NGAAQILCSS 360
  361 TSSGTYTNSA CLSGQTMFFT LSNIPPNQSP ITGITMQIIN SSPSTTDVGL TITSSVSINN 420
  421 QIILFPQYLT GAYTYLSYPF ICMANPYTQY LSVTIPNFQL PYDIDGLLMS AQFYVQPFLP 480
  481 AQSYSQAYQR DTSSASILNA SCGNTQLQIN KNFFSSAQVI TANPSDLQVG ATQATHIVKI 540
  541 ISKYTFVSSV GKIQLTLPPT LSINPSGSIL LFILLNQQIN NIIIQQAFSC TAKLLLPDQS 600
  601 LVSITVTSCT YTGSPVIITL SYSYGGTLQA TGFVFTFNQV INPTQIQYSG NFQASTFLRN 660
  661 GSVSDANDPS QTNFGFYTQP APFSTANLVN NGIGTKLVYT FSPYTLTLAS PVTMLAGDQI 720
  721 LVNFPSYISE INSISITTPS SSLSATSSNN QVPLVLSVSQ NIPASTSIII QFTIRNPPVS 780
  781 NLDYTFTIVA QKATPTIYLQ SNINYGSADS ITPTGFSSFI VSSSSPQNLA NAVYSVSFTP 840
  841 NVLLQNPSTM ILTFIAPTTT HNFLTTGSTT CSAVTNSLII SCTPNSPSTN QLTITLNSMI 900
  901 SPAASYQFTI QNVLNYMSLA PFIIKGDIGY SQNQVGNEST STISNTQILS LSAVTLSIQN 960
  961 YILGIQSQYQ FSINNVSPFP ALGNMIITTT NLVAFIVPST VSVNLSACPG TSTASQLNLS1020
 1021 CYPNQDSSTI TIQAVNNPTQ LIQQSTTPFV ITLNEIVGGN SYAIKSYTSS NLVYTNQCNI1080
 1081 SSFCKTCQNS NQSICQSCYS TNSITYQSST VYVQETILNQ ATSFQSCVAS CPQQSYQTSQ1140
 1141 AGQAVCLQCD LSCATCINSS TNCTSCSGNL YLDTTTNTCN TTCPAKYFKS SNNQCQLCSS1200
 1201 VGNCLTCTSA NVCTSCDITL YLQNTQCVTQ CDRNGGRQCM PCPTGCNTCT SALNCTSCSV1260
 1261 GYIQFQTTCV QSCPQGYSKL IQNGVYVCGV CDPKCKTCDT LSTTCTSCYD YTYLYNQTCV1320
 1321 TQSQIPEGYY GDNTTWTVQP CMTYCISCSF KALCNTCASQ AVIYQGICYA SCPSNVPVPD1380
 1381 GAGGCKEAII PTAISDNNTK IVPFPMLLSC IAFCISVYFS KYEKPQTFVP GCIVGFCALF1440
 1441 EWISWIILIG ISFSNDGATS ITTITAVIGF VLIYLINFVY FMLYKKNISP DPSFMEWQLQ1500
 1501 HKNRICKNVS IFFSCVISFK IQKIIFCKHQ NSTQIYILSL DTLLVTIFMI IFMIWEALKN1560
 1561 EAFFDENYNL KFDQMSYFTQ RFFPFDQSYM ERAKQRSVYG HLKNSESNSS LIDFGKENKV1620
 1621 TKVEQLQQPQ SQIMDPNDIS TNAALDRNVI NNSNYGAPYL IQDEISESSK PGKKRQFEKR1680
 1681 HIAPVFDNKN FPPIQENSLE DEDEDFYEED IQNQSMKKMV GVQNSRQGLV NPNGFARNKF1740
 1741 ISLDDQQDLE NQRNNHLNNS TGLRNNQTNS FNKNNCNEEI TSQYNQADKI YQNPQQQQGQ1800
 1801 KINKGSTGVH LQEDEIYYEE QENQKQFSKQ QNVEKLQEKT AMIAVSSMIC GAATSKDTKV1860
 1861 DVDKNENITK QVHLQSNIDN LKEDNSQIPE ISQAKGVVTE TGITENEKIK NEKQKSNQNE1920
 1921 NNIDKQSNIS KRNLNIIKNE NESNICQEIN KINEMGNKQD SINNQDKNIN DKEHNLTDRN1980
 1981 SIVKEEENKF NLSKNVINPS NKKADGNENL FYFNNPLNSQ NEKNQNSSKL NKEKNKNIKM2040
 2041 NQQRDAFDEN LSKKNKQGKN SKMITPIQSQ LEKNNNQEIQ KANQNGISDF NGANQNQKTT2100
 2101 ESKSKQANDI QNAEENKVER IMPIVEDLDE DLSKQDKNLN EIEKKQKIIT SHYNLDGNTL2160
 2161 KKQAPQKNNL LGISDSDEKF NQNLNNINEQ AQQKNNIYDS DESLHSVSEA DANFNEISPS2220
 2221 DFNILNQRYE EDFNLRGPQL ASQVQLNQQS LRYLNRNITS NQSEDIENTK IISSITQNEQ2280
 2281 GLHALQQSNR NTSLNILSAQ NFQNEFKMPQ NEQKQGRIVN GSLFQDANSV SINIKQNRQP2340
 2341 HQQGKLNNQN LTNENKNENS NSILPNPNMN SNKVDQMLVE NLDNFNKTFN SATTPQAQYQ2400
 2401 RNFNLSFNNQ DPQMSQTQMY RGNMSSRSKG NYSPSSQNIT YKVPATDLQK LKSLEQIYLQ2460
 2461 RIEANSKTSQ ASRKNILKNK KKKIQREISQ DPNFKQDSIK QMKSPNRVSE IYFGERVQNI2520
 2521 EPYVFNQNGE DGMDFEEDFE PENLNFESNF 

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