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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|118348580, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSEHQTEIC QIRQLLLKEK NLVITNRNLK GPLTQSYIFV EEDNNTFIKY ALKIQNIAVE  60
   61 GSGEIDQLKL LKCKNGVQFI KDCCHQSIGE VVDEFVIEKY HFTQFQDIFC SLNDWVRQNQ 120
  121 GRKISDYKFV SFAGKILDGL EFIHEKQCFL KDISLDTLLI NKDDEVKICS VCQDSSDLIS 180
  181 LQNQSQNFIQ SLPYKPPEYI EKIYNKESYN YTKQGDIWSY GACLSFLGGG QIKQVQKNKN 240
  241 ESQFMITYCH NISKKSNEFV KFILNIDPLK RPNLREIRDK LNSFFQNSIQ KAIISTGSEL 300
  301 TNIQEEDEQI IIQMEQNSTK NIQVLSLMKC IQEILTQKEI RSPYKKLQVH LIYFKIICII 360
  361 SLGLAIALTS LKDAEIFLIS LAIQFLLTII QFIQDKTNSI GQFSIINFFQ SIVELSTLIF 420
  421 TTSDYQEINI LYSLFVLLQQ IQNFLPYLQS LQDPSQNQNN NQIQNQNEAQ NKQNGEFSYA 480
  481 FFIIFNCIPI FICISLANDQ NLKIVSTIRL IVFYLAFISI QVQIKYKTQF IKSTPQFDSM 540
  541 IRFFYISLNI LDFFIFFQNF TQVSDFILAF FCLANTIFIG FIASKIFSNI YLAGQLLYTF 600
  601 ASVSSFIAQQ ATQQIQIECY LIFGLSTLIQ FISMAISIKY LSCKVCIEKS ANRQIKQCIY 660
  661 KIIKAIMSGD NNTNNSATEQ VSKKNKYRKD KPWDNDPTLD KWKIEPFNKG DMSEPLAEES 720
  721 SFATLFPQYR EKYIQECFGN VKKVLSEYGI KAELNLTEGS ITVRTTKKTW DPYAIIKARD 780
  781 CIKLLARSVP FQQALRVMED GVFSDVVKIR SLVKNKEKFI KRRQRLIGPN GQTLKALELL 840
  841 TNCYIMVQGS TVSCIGDWRQ LKILRRIVED TMFNIHPIYN IKELMIKREL AKDEKLKNEN 900
  901 WDRFLPQFKK MNVKKKAKKQ KVEKKEYTPF PPEQQPRKED IAMETGEYFM TEKEKKTKDL 960
  961 RNKMQKSEEK LKEKIEKQMK LYEAPEVEKE IKKEEKKQKK KEKATESASI EELKNKFMGN1020
 1021 TVKKVKIF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle