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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.11280, orf...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTSIPTESP LTTNNTTTTT AADISTTSGT TATPAQASVP TSTSSIADTH HSSCSTTDFL  60
   61 TWKNPIKTGK VFGSLVFGLI VLKTVNLFNI FFHLAYIGLL ISAAAEYSGK LITGKGFLAN 120
  121 FKPTGKLYAK RFNDEVLPEL ANFNVHLEES FNKIVYSHDI ETTLKAAGIS YILYKLTSWF 180
  181 SLYTLIFIFV VLIFTVPVIY KTYKKEIDAA VADITKTIKT KSAEFTEKAH KAAGPHIDTL 240
  241 IKKTGPIGSF IQSKLPVRTA GSTVGDSKAT SYGTDADKSI AGTTSATGTS SATANSTTVP 300
  301 VSVPAATSAS SAEPISTGHS TGASQFPSAP TSGLHPSTVE DVIKQASEEA DEFADTTQES 360
  361 FKPTLH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle