YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|33090009
Protein type:	Transmembrane
Type Confidence:	0.73
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSASEGHFD AYEALDLTEF GKNQPWWRKL FGHESRSSGE KYSVATQLLI GGVTGWCTGF  60
   61 IFQKVGKLAA TAVGGGFFLL QLANHTGYVK VDWTRVEKDM KKAKEQLTIR KSAQIPTEVK 120
  121 SKAEEMVCFV KKNVLVTGGF FGGFLLGEAP RASRIGTPGS PTPSLGSGHC CIHAALHVRR 180
  181 SQRRTRCYLQ AARGRTPKGD LAKPLGTTAV HALGTGLSP

Type	Start	End	Confidence
Cytoplasmic	1	42	0.66
Transmembrane Helix	43	62	0.57
Non-Cytoplasmic	63	68	0.74
Transmembrane Helix	69	88	0.55
Cytoplasmic	89	219	0.50