YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RPA3676
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.32
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIADLLRISL FPALMAFAAT SDLLTMTISN RISLLLVAGF LVLAPLTGLG AYDILLHFGA  60
   61 GALVLAVAFG CFAMGWIGGG DAKVVAAAAL WFGFDHLLDY LLYASLFGGA LTLLLLGFRQ 120
  121 WPLPYRLACQ GWVLRLHDQQ TGIPYGIALA MGALVIYPHT EWIKAVDIAR FTLS

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.32
Transmembrane Helix	6	26	0.70
Cytoplasmic	27	31	0.38
Transmembrane Helix	32	52	0.86
Non-Cytoplasmic	53	57	0.35
Transmembrane Helix	58	80	0.88
Cytoplasmic	81	96	0.46
Transmembrane Helix	97	118	0.88
Non-Cytoplasmic	119	140	0.48
Transmembrane Helix	141	160	0.85
Cytoplasmic	161	174	0.54