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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|192289727, gi...
Protein type: Transmembrane
Type Confidence: 0.66
Topology Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNANLRNFAL WVIIVLLLLA LFTLFQNPGQ RTASQEIPFS QLLSEIDQNH VRDVVIQGQE  60
   61 IRGTFTNGST FQTYAPNDPS LVTRLYNGKV SITAKPPGDN VPWFVSLLVS WLPFIALIGV 120
  121 WIFLSRQMQG GAGKAMGFGK SRAKMLTEAH GRVTFEDVAG VDEAKQDLQE IVEFLRDPGK 180
  181 FQRLGGRIPR GVLLVGPPGT GKTLIARAVA GEANVPFFTI SGSDFVEMFV GVGASRVRDM 240
  241 FEQAKKNAPC IIFIDEIDAV GRHRGAGLGG GNDEREQTLN QLLVEMDGFE ANEGVILIAA 300
  301 TNRPDVLDPA LLRPGRFDRQ VVVPNPDVVG REQILKVHVR KVPLAPDINL KNIARGTPGF 360
  361 SGADLMNLVN EAALMAARRN KRMVTQSEFE DAKDKVMMGA ERKSLVMTEE EKLLTAYHEG 420
  421 GHAIVGLNVP ATDPIHKATI IPRGRALGMV MQLPERDKLS MSLEQMTSRL AIMMGGRVAE 480
  481 EMVFGREKVT SGAASDIEQA TKLARMMVTR WGLSEELGTV AYGENQDEVF LGMSVSRTQN 540
  541 ASEATIQKID AEIKRLVEEG YNEAKRILTE RRADLEALAK GLLEYETLTG DEITDLINGK 600
  601 KPNRESVLEP SGPRTSAVPP AGKPRPRPDP GLEPQPQA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle