YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TolQ
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPADVTQLA PAVSTDVSLL SLFWHAHWVV KSIMLGLLGC SVWVWAIAID KLLLFSRTKR  60
   61 AMDRFEQAFW SGESIDELYR ALSAKPTHSM AACFVAAMRE WKRSFESHSR SFAGLQMRIE 120
  121 KVMNVSIARE VERLERRLLV LATVGSAGPF VGLFGTVWGI MSSFQSIAAS KNTSLAVVAP 180
  181 GIAEALFATA IGLIAAIPAT IFYNKFTSEV NRQTQRLEGF ADEFSAILSR QIDERT

Type	Start	End	Confidence
Non-Cytoplasmic	1	32	0.65
Transmembrane Helix	33	54	0.87
Cytoplasmic	55	137	0.98
Transmembrane Helix	138	160	0.94
Non-Cytoplasmic	161	181	0.87
Transmembrane Helix	182	203	0.89
Cytoplasmic	204	236	0.96