YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RPA0511
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPASNAVTS GLRAGLLSAA VTGCLAFALL AAPAARAQDA NPVLAKVNGA EIRQSDVDLA  60
   61 EQELGPSLAQ LDPASRKENV LAFLIDMKIV AKAAEDKKIQ DNADFKKRLD FARNRLLMDD 120
  121 VLAAEGKAAT TDEAMKKVYD EAAKQISGEQ EVHARHILVE TEDEAKAVAE ELKKGADFAE 180
  181 LAKKKSKDPG ASDGGDLGFF TKDQMVPEFS AAAFALEPGK ISDPIKTQFG WHIIKVEEKR 240
  241 NRKPPSFDQV KAQIEQYVTR KAQSDYVSKL RQAAKIERLD QPAAKPDAAK PADAAKPADA 300
  301 AKPATPAPAK K

Type	Start	End	Confidence
Signal Peptide	1	37	0.99
N-region	1	28
H-region	29	34
C-region	35	37
Cleavage Site	37	38
Non-Cytoplasmic	38	311	0.99