YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PAR16_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLSNRAAAR EAASRDVLAA DLRCSLFASA LQSYKRDSVL RPFPASYARH DCKDFEALLA  60
   61 DTGRLPNLKE LLQSSRDTDK QAWDLVSWIL SSKILTIHSA KKAEFEKIQQ LTGAPHTPVP 120
  121 TPDFLFEIEY FDPANSRFYE TKGERDLIYA FHGSRLENFH SIIHNGLHCH LNKTSLFGEG 180
  181 TYLTSDLSLA LIYSPHGHGW QHSLLGPILS CVAVCEVIDH PDVKCQIKKK DSKEIDRSRA 240
  241 RIKHSEGGEI PPKYFVVTNN QLLRVKYLLV YSQKQPKRAS SQLSWLSSHW FVIMMSLYLL 300
  301 LLLIVSVTNS SVFHHFWNRV KR

Type	Start	End	Confidence
Non-Cytoplasmic	1	289	0.80
Transmembrane Helix	290	313	0.88
Cytoplasmic	314	322	0.75