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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|189442083
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANNNLNRPL NTNVADSSNS SSTPGTAPPP SSSDPQVLGH QAPSSSASSL TEDCSSSFAR  60
   61 DLNSYNNGQS GATGAVSWEA PHEPSEANAV SQIHPRNGEH SLQQKPKPQK VSGSSSLATS 120
  121 ERYKTELCRP FEESGICKYG HKCQFAHGYR ELRTLSRHPK YKTEPCRTFH SVGFCPYGTR 180
  181 CHFIHNQPEQ QPVLSESTLE EPSSFNGSNV LHLGVNGEQQ PGLQSDSPSG FLSVNSQALQ 240
  241 APLQLNQQAL SSGGVMPSSH PAAANLRMMC CRTSSSTTAH DADKDPDKDA DKDPSNNSAN 300
  301 DALAFPQEPG DFSPVAFQNP NTATTTPTAF YNNQQQMGLA ASAQFQMPLA RPLPSATIFG 360
  361 QASVGPALTP GAAMAPGAAL APAAALTPAA ALAPGAAMAL GAAMATGAAM ATGAALTPGA 420
  421 ALALGAAMAA GAALAPGAAM APGAAMATGA ALAFGAAMAT GTTLTPGAAM ALGAAMATGA 480
  481 ALAPGAAVAP RAALAPRAAF APGAAALAPR AALPPGAALT PGAALAPGAA LAPRAALPPG 540
  541 ATLRPGAALI PRAALAPGAA LAPGAALTPG AALAPGATLA PRAALAPGAA LAPRITITSR 600
  601 AAITPGVAIA PGVATASTGI LAPGAATATV GNTSSTTITA ATAAEGAAPH FTFQLPDVES 660
  661 ESESESLEFD VVTSTLDSLL VSDDEDEDDF LRRSSSSSSL NESEFDNTNS SRRLPIFSRF 720
  721 SDSEK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle