YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83590802, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.60
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALSNEEIER YSRQIILKNI GGRGQERLKQ GKVLIVGAGG LGSPVAYYLA AAGVGTLGII  60
   61 DSDNVDLSNL QRQILHTTGR LGQPKAESAR ETLLALNPAL TINTYPLRLG KENILDIIRD 120
  121 YDVIVDGVDN FPTRYLLNDA CVMTGKTLVE AGVLQWDGLV MTIKPGQGPC YRCIFPDPPP 180
  181 PGAVPSCQEA GVVGPVPGVI GCIQATEVLK ILLATGETLT GRLLIYNALE MRFREIKAER 240
  241 NPDCPVCGDN PSIRELEEYT FVCETQCGR

Type	Start	End	Confidence
Cytoplasmic	1	32	0.57
Transmembrane Helix	33	52	0.55
Non-Cytoplasmic	53	269	0.96