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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|83573282, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVAEPAMGN VALALARVFL YGGGAVLSQL KITDTTLRDG HQSLWATRMT TADMLPIIEK  60
   61 IDSVGYHSLE VWGGATFDVC MRFLDEDPWE RLRTLKKYAR RTPLQMLLRA QSLVGYQLYP 120
  121 DDVVRAFIAR AAANGIDIIR IFDALNDLRN MEVPVEAAKK EGVHVQGTVV YTISPVHTTE 180
  181 HYLKTALELE SMGVDSICIK DMAGLLAPFE AYKLVKLFKE KLHVPVQLHS HYIGGLAVGA 240
  241 YLEAARAGVD VVDTASVPLA FGASQPPVET VVRALEGTPY DTGLDLNLLF EIARYFDDLR 300
  301 RELGYERGVT RITDMWVFQH QVPGGMISNL VSQLKEQKAA DRINEVLAEI PRVRADLGYP 360
  361 PLVTPTSQIV GTQAVLNVLL GERYKMVPGE VKNYVRGLYG RPPAPISEEI RRLIIGDEEP 420
  421 IQGRPADILE PRLEEARREI GDLARNEDDV VAYAMFPQIA RKFFEKRQQG QLRPGRQSLP 480
  481 SRGQDKAEAG GTAKMDLKDI TQLIKALEET GITELNLESE GVKVMIRRGS GQGAAEIPAP 540
  541 EIKTAAEVLA TDGGAQETPV PAGDIIEVRA PMVGTFYRAP SPDAPPFVEV GTRVKAGQTL 600
  601 CIIEAMKLMN ELTAETGGQV VAILAENGQP VEYGQVLFQI KKD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle