YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83590119, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEATAVNETE AQNIHIRPPC PGGFHYTVQS GDTMYFIARR FGISLNDLIA ANPQVRDPNL  60
   61 IYPGQVLCIP KMAPVPPGPC PGGFLYTVQP GDTMYTIAQK FNVSLDALIA ANPQIKDPNL 120
  121 IYPGQVLCIP ASAPVTCPNG FIYVVRPGDT LSGIASMFGT TVDQIMAANP HIKDPNLIYP 180
  181 GQRLCIPLIP TAMPRRHCFM MHPTHHCPGA MGMGMINIEK RELLVVARDL PDPRHFGKDR 240
  241 VVLMVRYREM EEFKTVEMMP MAHGMMMCHH MMEGTMDKDP VFLIGAAVGF PFAFGPLFLG 300
  301 AIVPIFI

Type	Start	End	Confidence
Cytoplasmic	1	280	0.84
Transmembrane Helix	281	303	0.93
Non-Cytoplasmic	304	307	0.60