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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71675223, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKTASTPSL TQEQLSDVLG YQLSQQEIES CLKNMENLTP KVGQFWQTAD AQTGIYIITK  60
   61 GKVRLLDTEG ELMTTLVAGA SFGESTLFPD NSFLSYSARA SVNLKLSYLS REALLPLIKK 120
  121 HPQIREHLYQ VALKLNALQK KAEPEIPNSL GKNLPEFNRT EYEQPEVIGQ KAINKAYFPS 180
  181 PTQRVGHLWQ RITRRYPFFA QQSGSDCGAA CLVMVARYWG KNFSVNRVRD IANVDRNGAS 240
  241 LRGLSAAAES IGYSTRPVKA SLDQLAKQKL PAIAHWEGKH YVVVYEVTHK QVIIADPAIG 300
  301 QRHLTYPEFK AGWTGYTLLL QPTALIKKLK DTTTPFWQFF ELVSPHGQVL LEVFITSLVI 360
  361 QIFGLITPLF TQLLLDRVVV QGSTLTLTAV GLGLVLFGLF QVAMTGLRQY LLDHTANRVH 420
  421 IAMIVGFIRH TFRLPMSFFE SRYVGDIIAR VQENRKIENF LTGEALSIVL DLLTVFVYVG 480
  481 LMFWYSWKMA LLALVIVPPF FLLALIATPF LQKISREIFA ALAEESSYLI QSLTGVNTVK 540
  541 SLAVEQTVRW RWEELLNKSI RKNFSGQVMG NRLQMFSLTI ESLVTTGLLW FGAWLVIQGE 600
  601 LTIGQLVAFN MLIGNVISPF QRLTVLWNQL QEVVIAMERI NDVIDTEPEE DLQSQARQYL 660
  661 TELRGNIIFD NVTFRYHPES DINVLENLSF EVKAGQTVAL VGRSGSGKTT ISKLVLGLYP 720
  721 PTDGKILIDG YDITAISLPS LRNKVGVVDQ DTFLFGGTIR ENLTMACPSA TLEDIVDAAR 780
  781 LAGADEFIQR LPMGYETQIG EGGGLLSGGQ RQRLAIARAL LGKPCFLVFD EATSHLDVES 840
  841 ERIIQRNLNT ILQGRTSLII AHRLSTVRNA DLILVLDRGV LIEQGNHEEL MAKRGHYYYL 900
  901 NRQQLDVG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle