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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|110167178, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQNHLSSTR RYDPEAIAKY YYYRLWLVMW RFLVIFFSFT SFVLGILWDK WRYKKVEDTP  60
   61 ERATQLRKIL TNLGPTFIKV GQALSTRPDL IRKDFLEELT KLQDQLPAFD NQIAISIIET 120
  121 ELGQNINDIY REVSPRPVAA ASLGQVYKAR LQSGESVAIK VQRPNLLPII TLDLFLMRWG 180
  181 ASWLSPWLPL NLGHDLSLIV DEFGTKLFEE IDYINEGHNA ERFATYFADD PSVKVPSIYW 240
  241 HYTTTNVLTL EWIDGLKLLD TKQIQGAGLN TDTLITAGVT SGLRQLLEFG FFHADPHPGN 300
  301 LFALTDGRMA YIDFGMMDQL EQDIKETLVD SVIHLINKDY QELAKDFVKL GFLAPDADIQ 360
  361 PIIPALEMVL GNIMGEKVKD FNFKTITDKF SELMYEYPFR VPAKFALIIR SLVTEEGLAL 420
  421 SLNPNFKIVD VAYPYVARRL LKGESPGLRR RLIEVLFKDG KFQWQRLENL IGIARTDQNF 480
  481 DILPTAQLGL QYLLSEEGEF LRKQLILAII EDDRIHTEEV SRLWDLIQDD LQPSRLFNFA 540
  541 LGALAEFSTQ RAAAILPSVM ATTNSQAKN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle