YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89949649, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.89
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNAKTKFIA LLFTAYIIAT FGLLIWAIQH SPSRAINTST AFGPAPDFSA ITDIAERKAT  60
   61 FFNYFTPIIE HKNTLILADR ERLAAVQNDW QEDATLSNTH QFYLSRWLKR YKIKEEWPIE 120
  121 KQLAELNKRM HIIPPALVLA QAANESAWGT SRFAQDGNNY FGQWCFKKGC GLVPSGRRAN 180
  181 AKHEVRKFKS PAGSVDAYLR NLNTHRAYKQ LRNIRAQLHQ ANQPITGVAL AEGLIKYSER 240
  241 GEEYVHELQA MMRSNGLEE

Type	Start	End	Confidence
Cytoplasmic	1	7	0.84
Transmembrane Helix	8	28	0.85
Non-Cytoplasmic	29	259	0.97