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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89951175, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSKKFLNSA TLIAAGIGLA LGIAATLILG GGNSTVQSEE SKSEEPLYWV APMDPNYRRD  60
   61 KPGKSPMGMD LIPVYEEGEK ANDEGPGTIN ISPDVINNLG VRTGLVERKR LHSEIVTVGY 120
  121 VRYDENKLIH IHPRLSGWVE KLYVKSAGDP VKKGEPLYAL YSPELVNAQE ELLLAISRNN 180
  181 TRLIQAAEDR LRALQIPREF INQLKKTKTV QQTVTFFAPQ GGVVDNLNIR EGFYVQPGTT 240
  241 MLSIGALDPI WVEAEIFERQ AALVEINDPV TMTLDYLPGR TWTGRVDYVY PTLDSKTRTV 300
  301 RLRLRFDNPK ELLKPNMFAQ ITVHTGSDEE MLVVPREALI RTGTQDRLVL ALGEGSFKSI 360
  361 SVKIGRQDQN WVEILEGVDE GEKVVTSAQF LLDSESSKAS DFKRLHHGGD KPKSVWVAAE 420
  421 IQSVMNDHRM VTASHDPIAE WDWPSMTMDF RISPNVDMSA LNPGTQLHME ISKLKDGGYE 480
  481 ITGTHIMGTK SQTAEVQSAQ VNGVVNTVDT INRTANIHRG PIPKWNRPSA TMDFYVSDDV 540
  541 DIKQLSPKAS IYFEFEIQDG EFVITRLLED EVMPDRGTDH SLDSSSADHS GMDHSQMDHS 600
  601 KMNHAVESID EVDHTQMDHS SHIRSSDKE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle