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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|90022618, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.09
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAKQQIYRV RRSYNQWVNN QTLEDYALRF TAKASRKWSL LRVANTALGS ISFLALEAIG  60
   61 AAITISYGFD NAMAAVLVVG LLIFFAGLPI CYYAAKYGVD IDLLTRGAGF GYIGSTATSL 120
  121 IYASFTFIFF ALEAAIMAKA LELTLGIPLA IGYIISSLVA IPLVFYGITF ISRFQLWTQP 180
  181 LWIALQLAPL IFILFNDATL VADWQSYTGT KQSSPGLNIL LFGAAASVMF ALVAQIGEQV 240
  241 DFLRFMPEKT AGNKTRWWCA LIAGGPGWII VGCIKLVIGS FLAVVAIQYG SSLIDASDPT 300
  301 TMYAIAYGYI TQNQHLALVL AGFFVVLSQL KINVTNAYAG SIAWSNFFSR LTHNHPGRVV 360
  361 WLVFNVSIAL LLMELGIYHA FESTLSIYAI IAVSWVGALV ADLIINKPLG FSPPNIEFKR 420
  421 AHLYDINPVG VGSMLIASIT GVLAYLGFMG EHAHALSHFI ALATAFICSP LIAWGTKGKY 480
  481 YIARPAYVFS DQHQHVKCSI CENNYETEDM AQCPAYDGYI CSLCCSLDAR CQDLCKTHQS 540
  541 ISTRLVTLAQ RCLPSFASNY LNIRLVHFVL LLTLVGAVTG VLLALVYTNI KTDSLTINQL 600
  601 LEATLWKVFF ILTIVAGVIC WLFVLAHQSQ IVAQEESQTQ TRKLVQEIEA HEKTDLKLQK 660
  661 AKEQAEAANN AKSRYLTGIS HELRSPLNTV LGYAQLMEMD SALSEANQNK IAVIKRSGEH 720
  721 LADLIEGLLD ISKIEAGRLE IQRNTIQFKS LLGQLEKMFL LQAQDKGLTF TCERLSPMPA 780
  781 TVMGDEKRVR QILINLLSNA IKYTEHGEVK FSINYRNQVA EFKISDTGVG INEDEYERIF 840
  841 KPFERVRRPG SPAVPGTGLG LTITRLLTDI MGGDISVERN PNGGSIFTVW LMLSRVDTPK 900
  901 TAQVKPRKIY GYEGEKKSIM VVDDDATHRG LIGDLLTPLG FGVVEAPDAE ACLAMISYFT 960
  961 PDIFLIDRRM PGMNGPELAA KLRQIGFSVP IVMVTANANE DILSHDELAQ QNNKEVSDTA1020
 1021 YNEYLVKPIK LDQLLQTLDR YLALQWKLAP SSSHSLQEIE SRAFNGDGLP TQDIREKLII1080
 1081 HAEIGHLSML KTIANQLAND PNINPLFLTQ LKKYINEVKF KKVIELLQVP SL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle