YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90022335, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARINLLPWR EEYRQEKKKE FFTQLVGVCI LAGLVAYVWI ASVDNAIAYQ NERNNILNNE  60
   61 IKMLSEQVKE IQELKKKRRE LSDRMKVIQD LQGTRPLIVR YFDEFAKAVP DGIYVTSLKR 120
  121 VGNALTIDGV SESNSRVSAF MRKLNASKYF DEPDLKTVDA VPELGEQAAK FTIHLKMVLP 180
  181 GDGEAQG

Type	Start	End	Confidence
Cytoplasmic	1	20	0.99
Transmembrane Helix	21	41	0.98
Non-Cytoplasmic	42	187	0.99