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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89949839, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLYKYTALA ACFIFSSFGG SALAKTVSVA SPNGQIVVNV DDDASNPSYT VIFNNEEVIS  60
   61 RSALGMAFKN AHALGEGFTI AASNKSSSDS TWEQPWGERQ LVRDNHTELQ VDFSHASHNP 120
  121 SRFTVRFRVF DDGVGFRYEV PKQKGLKGLI EITNEYTEFN IQNSGNVTAW WIPARGWNRY 180
  181 EYVYNTSALN EIDRVHTPFT FKLASGTHVS IHEAALVDYA GMALDQRREG MLKADLAPWS 240
  241 DGVLVKKEGA FNSPWRTIQI ASNAVGLLNS DLILNLNEPN KLGDVSWVEP AKYVGIWWGM 300
  301 HINENTWGNG PKHGATTANT KYYMDFAAKY GFAGVLVEGW NIGWDGDWYS NGDVFSFTKP 360
  361 YDDFDIAELA AYGKEKGVRI IGHHETSGSV TNYKNQMADA FDLYQKHNVA QVKTGYVADG 420
  421 GRIKRVDENG IVRYEWHDGQ FMSREYLRSV TEAAKRKISI NTHEPIKDTG LRRTYPNWIA 480
  481 REGARGQEFN AWGSPPNPPE HTTILPFTRM LSGPMDFTPG IFDLSFNGLE GENRPRTTLA 540
  541 KQLALYVVLY SPIQMAADLP RNYEANLKPF QFILDVTTDW QESIALAGEV GEFVTIARKA 600
  601 KDSDDWFLGT LTDENKRNVH VDLSFLDAGK KYEAQIYRDG NDANWQTKPY DIIIENKVVT 660
  661 SSDSLTLPLA TSGGAAIRFK LLGN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle