YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|48861429, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.55
Topology Confidence:	0.45
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKELLYSLTK ISSVATVAGV LLTGCMTYDP YTGEEKTSNA TKGAGIGAVT GAIIGAATSS  60
   61 DKDRDRGIIT GAVAGAAIGG GVGYYMDKQE AELRHQLQGT GVQVRREGNN LFLVMPGNIT 120
  121 FDTAQYSIRS QFYEVLDSVA VVLKKYDKTA ILVSGHTDNR GSSDYNQTLS EQRAGSVKAY 180
  181 LMQKGVAAGR VNSVGYGYRY PVASNDSAAG REQNRRVELK LEPIE

Type	Start	End	Confidence
Cytoplasmic	1	7	0.47
Transmembrane Helix	8	28	0.45
Non-Cytoplasmic	29	225	0.79