YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90020540, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNSPMRVVV LISGSGTNLQ AIIDGQQDGS LPIKIAAVIS NKPDVKGLQR AETANIATAV  60
   61 VDHKQFESRE SFDAALQLEI DKHQPQLVVL AGFMRILTPA FTAHYAGKML NIHPSLLPKY 120
  121 QGLHTHQRAI DAGDSIHGVT VHFVTAELDG GPAAIQAQVK IDSNDTADTL AAKVQVQEHI 180
  181 IYPLAVKWFA EGRLHMQANQ AWLDGKALPP CGHLLAVES

Type	Start	End	Confidence
Signal Peptide	1	21	0.76
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	219	0.99