YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|48855976
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNHIKLSTG MNNLLNNKWA WAVVILVIIN FASIGVMWAT LCRSGHHMRP DHMQHMGYHS  60
   61 GGPMNKGERE DHGNRDFLAQ ALNLTPEQKV AFKKLKEEHF KAMESNRKEI GALRKEVIEH 120
  121 LGKPESEVEP TFQKIGALEI KNQEEAFKHF SEMYALCTDS QKVLLKEKLS NVMNHPRPGN 180
  181 GASKNNRMYG HKKGMHGKQF RQCKQHTCTP PDGEHEKANK

Type	Start	End	Confidence
Non-Cytoplasmic	1	18	0.65
Transmembrane Helix	19	42	0.91
Cytoplasmic	43	220	0.66