YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78222090, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.78
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFARLHEDIQ SVKERDPAAR SSVEVFFCYP GLHAIWFHRF AHWFWMREFF FLGRFLSHIG  60
   61 RFFTGIEIHP GATIGRRLFI DHGMGVVIGE TAEIGDDVTI YHGVTLGGVS LEKKKRHPTV 120
  121 DNNAVIGSGA KVLGPFTVGV GAKIGSNSVV VKEVPANATV VGIPGRVVMA ADEPAKKADF 180
  181 EHGKLPDPEA KAISCLFDQL RELERKYADL ADEHAALRRR VESGK

Type	Start	End	Confidence
Cytoplasmic	1	20	0.68
Transmembrane Helix	21	37	0.63
Non-Cytoplasmic	38	225	0.54