YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78222959, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKNHVVIGV IIVAALALLF TLSIQIARLI LGDGPMVSSG EGVGYVEVKG PILESEEIVK  60
   61 QLSEMRKKTN VKAVVLRIES PGGVIGPSQE IYEAVKKLAK TKKVVVSMGS VAASGGYHIA 120
  121 IPAAVIYANP GTITGSIGVL MKLANVEGLM DKVGMKAFTL KSGKFKDAGS PVRALTDEDR 180
  181 ALLQGVIDNL HTQFVKAVAE ARKLPVEEVR RLADGRVYTG EQAVSLKLVD RLGTLEDAVE 240
  241 EAGRLAGIKG EPTLLMPPKK RKHLRDYLLE EASGFFREIV RREGGFSVNY ELDPAVGNGG 300
  301 R

Type	Start	End	Confidence
Signal Peptide	1	27	0.62
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	301	0.82