YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78193910, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQSLGAKTL LFPTPVLMVG TYDHAGKPNL MNAAWGGICC SDPPCVTVSV RKSRHTYDSI  60
   61 VERQAFTVGI ANEATMAEAD YVGIASGRDA DKFAVAGLTP VRSELVDAPY AEEFPVVLEC 120
  121 RLLHTLEIGI HTQFIGEIID VKADKNILSE DGLPDILKIQ PLVFDTAHRG YHAVGPLLDR 180
  181 AYSVGKKLL

Type	Start	End	Confidence
Signal Peptide	1	25	0.52
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	189	0.99