YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78193533, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSTIDYGK TKTFLIDTTK CTGCRGCQVA CKQWNQLKGE KTTFFTGEGY QNPPQMSEFT  60
   61 FTRVKFKDYE KHGQNEFAFY KEMCMHCNDP ACASVCPVGA FHKTPEGPVI YNAKKCIGCR 120
  121 FCMVACPFGV PKYEWSKAFP LVKKCTGCYS RVKNGLHPAC ATACPTAITY GSRDEMLKEA 180
  181 EKRMAAKPDR YFKVVYGKEE AGGTSVLYLT QQPLDELGFR PVTKRPLPSY TWQALRFVPG 240
  241 IFLTVGGTLS LVTWFQHRKD RVRREEEERN SRKEGNQ

Type	Start	End	Confidence
Non-Cytoplasmic	1	233	0.90
Transmembrane Helix	234	255	0.88
Cytoplasmic	256	277	0.84